miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|29679693|gb|CB675968.1|CB675968 CTTTTTTAGTACTAAAATACTTTATCTGTTTTATATTATAAGATTTTCTAGCATTGTCTACATTCATATATAGGTGCCTA
GATTCATTAACATCTATATGAATGTGGACAATATTAAAAAGTTTTATAACCTAAAACGGAGGTAGTATATTTCATTCATC
TAAAATCATTTATATTTTGAGGTGGACGAAGCAATTCTAAATCACCCCCAGCTGGATCGATCGATCTGCCTCTTAACCGA
CACGGGCAGAATCGCATCACGGGCGCGCTGGCACCGGCACCGGCACGGCCTTGAGCGGCGTGACCATGTTGAGCGACGTG
CCGAACCGGCCCCTGACGTCGACGTCGCACGGCCGCATCCCGCCGGGGAGCCGCCACTCGAACGCGTGGAGCAGCGACGC
CAACACCAGCGTCACCACCCTCGTCGCCATCGGCGTCCCCGGGCACGCCCTCCTCCCCGCCCCGAACGGCATGAACTCCA
GCATCTCGCCGCCGCGGAACGACCCGCCGGCCGCGACGAAGCGCTCCGGCTCGAACTCCTCCGGGCGAGGCCACGACGCC
GGGTCGCGCATGATGGACCACACGTTGACGATCACCTTAGTGCCCCTGGGCACCGCGTAGCCGCCGACCGCGGCGCCGTC
GGCGACGGCCTCGTGCGGCATCAGCAGCGGGCTCGGCGGGTGCAGCCGCATGGTCTCCATCACCACGGCGCTCAGGTACG
GCAGCCTGCCGATGTCCGACTCGTCCGGGTGCGGCTTCGCGCCCAGCGCGTCGCGCAGCTCGGCGCGCGCCCT




Most similar to sp|O64637|C76C2_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|O64637|C76C2_ARATH Cytochrome P450 76C2 OS=Arabidopsis thaliana
           GN=CYP76C2 PE=2 SV=1
          Length = 512

 Score =  134 bits (337), Expect = 7e-31
 Identities = 74/169 (43%), Positives = 99/169 (58%)
 Frame = -1

Query: 793 RARAELRDALGAKPHPDESDIGRLPYLSAVVMETMRLHPPSPLLMPHEXXXXXXXXXXXX 614
           +A+AE+   +G K   +ESDI  LPYL AVV ET RLHP +PLL+P +            
Sbjct: 337 KAQAEIDCVIGQKGVVEESDISALPYLQAVVKETFRLHPAAPLLVPRKAESDVEVLGFMV 396

Query: 613 VPRGTKVIVNVWSIMRDPASWXXXXXXXXXXFVAAGGSFRGGEMLEFMPFGAGRRACPGT 434
            P+ T+V VNVW+I RDP  W          F+      RG +  E  PFGAGRR CPG 
Sbjct: 397 -PKDTQVFVNVWAIGRDPNVWENSSRFKPERFLGKDIDLRGRDY-ELTPFGAGRRICPGL 454

Query: 433 PMATRVVTLVLASLLHAFEWRLPGGMRPCDVDVRGRFGTSLNMVTPLKA 287
           P+A + V L+LASLL++F+W+LP G+   D+D+   FG +L+   PL A
Sbjct: 455 PLAVKTVPLMLASLLYSFDWKLPNGVGSEDLDMDETFGLTLHKTNPLHA 503